Banner

GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2076028 1 rs4821808 chr22:39065739 TOMM22 chr22:39077954-39080763:+ -0.17 -3.69 0.000246 Resting heart rate
THCA cis rs2076028 1 rs4821809 chr22:39065743 JOSD1 chr22:39081549-39096459:- -0.15 -4.03 6.54E-5 Resting heart rate
THCA cis rs2076028 1 rs4821809 chr22:39065743 TOMM22 chr22:39077954-39080763:+ -0.17 -3.69 0.000246 Resting heart rate
THCA cis rs2076028 1 rs4821810 chr22:39072098 LOC646851 chr22:38974125-39052634:- 0.14 3.67 0.00027 Resting heart rate
THCA cis rs2076028 1 rs4821810 chr22:39072098 TOMM22 chr22:39077954-39080763:+ -0.17 -3.71 0.000236 Resting heart rate
THCA cis rs2076028 1 rs4821811 chr22:39075145 JOSD1 chr22:39081549-39096459:- -0.14 -3.69 0.000249 Resting heart rate
THCA cis rs2076028 1 rs4821811 chr22:39075145 LOC646851 chr22:38974125-39052634:- 0.14 3.57 0.000395 Resting heart rate
THCA cis rs2076028 1 rs4821812 chr22:39075235 JOSD1 chr22:39081549-39096459:- -0.14 -3.78 0.000179 Resting heart rate
THCA cis rs2076028 1 rs4821812 chr22:39075235 LOC646851 chr22:38974125-39052634:- 0.13 3.45 0.000607 Resting heart rate
THCA cis rs2076028 1 rs4821812 chr22:39075235 TOMM22 chr22:39077954-39080763:+ -0.16 -3.39 0.000768 Resting heart rate
THCA cis rs2076028 1 rs4821816 chr22:39113134 JOSD1 chr22:39081549-39096459:- -0.14 -3.51 0.000499 Resting heart rate
THCA cis rs2076028 1 rs4821816 chr22:39113134 LOC646851 chr22:38974125-39052634:- 0.14 3.56 0.000407 Resting heart rate
THCA cis rs4820539 1 rs4822357 chr22:23473231 GNAZ chr22:23412669-23467221:+ -0.26 -5.46 7.84E-8 Bone mineral density
THCA cis rs4820539 1 rs4822358 chr22:23474795 GNAZ chr22:23412669-23467221:+ -0.25 -5.37 1.26E-7 Bone mineral density
THCA cis rs4820539 1 rs4822360 chr22:23482460 GNAZ chr22:23412669-23467221:+ -0.26 -5.66 2.56E-8 Bone mineral density